CDS

Accession Number TCMCG006C93896
gbkey CDS
Protein Id XP_013676146.1
Location join(892639..892911,893465..893701,893774..894025,894106..894185,894259..894364,894434..894547,894623..894721,894799..894888,894972..895078,895198..895341,895484..895766)
Gene LOC106380845
GeneID 106380845
Organism Brassica napus

Protein

Length 594aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013820692.2
Definition DEAD-box ATP-dependent RNA helicase 18-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description Contains the following InterPro domains RNA helicase, DEAD-box type, Q motif (InterPro IPR014014), DNA RNA helicase, DEAD DEAH box type, N-terminal (InterPro IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro IPR000629), DEAD-like helicase, N-terminal (InterPro IPR014001), DNA RNA helicase, C-terminal (InterPro IPR001650), Helicase, superfamily 1 2, ATP-binding domain (InterPro IPR014021)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14809        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCCATCATCGTCGAACACAAACAAAGCGTTAACGGAGACGCGTTTCTCCGACCTCGAGCCTCCCCTCTCCGAAGACATCATCGAGGCCCTCGAACGGTCCGGTTTCGAGTTCTGCACTCCGGTTCAGGCCGCGACGATCCCTTTGCTCTGCCGCCACAAGGATGTCGCCGTCGACGCCGCGACCGGCTCGGGAAAAACCCTAGCTTTCGTCTTACCATTAATAGAGATTCTCCGTCGCTCCACCTCTTACCCTCCCAAGGCTCACCAGGTTATGGGGGTGATTATATCGCCGACAAGAGAGTTATCAACGCAGATATACAACGTGGCACAGCCATTTGTCTCCACTTTGCCGAATGTGAACTCTGTGCTGCTCGTTGGAGGCCGAGAGGTGAAGTCCGACATGAGCACTATAGAAGAAGGAGGATGCAATCTCTTGATCGGCACACCTGGAAGGCTCTCTGATATAATGGAACGAATGGAGATTCTCGATTTCAGAAACCTTGAGATTCTTATATTAGATGAAGCAGATAGGCTTTTGGAGATGGGGTTCCAGAAGCAGGTGAACAGCATTATATCTCGCTTGCCGAAGCAGCGCAGGACTGGTCTCTTTTCAGCTACGCAGACAGAAGGTGTTGAAGAGCTGGCCAAGGCTGGGCTTAGGAACCCTGTGAGAGTTGAAGTTCGAGCTGAGTCTAAGTCTGAATCATCATCCCAGCAATTAACAAACTCCAAAGTGCCTTCTGGTCTTCACCTTGAGTATTTGGTATGCGAAGCAGATAAGAAGTCATCGCAACTAGTGGATCTCCTCGTCGAGAATGAAAAGAAAAAGCTTATAGTATACTTTATGACTTGTGCTTCTGTTGATTACTGGGGACTAGTGCTTTCGAAAATCCCTGCTCTGAAGTCCATTTCTTTAATCCCTATCCATGGGGATATGAAGCAGAATGCAAGAGACAAGGCGTTAGCTTCGTTTACCGAGGCATCAAGCGGTGTCCTTTTGTGCACTGATGTGGCTGCACGTGGACTTGATATTCCGGGGATTGATTACGTAGTTCAGTATGATCCTCCACAAGACCCTAATATGTTCAACCATAGGGTTGGCAGAACTGCAAGACTGGGAAAAGAAGGAAGAGCCATCGTTTTTTTACTGCCTGAGGAAGAAGACTATGTAGAGTTTATGCGGAGAAGAGGGGTCCCTTGTCAAGAGAAAGAATGTTCTGAGGAAGCATCTGATGTCATCCCTATAATACGGTCACTAGCCATGAAGGACAGGGCAGTGTTGGAGAAGGGACTAAAGGCGTTTGTTTCCTTTGTCCGTGGTTATAAGGAGCATCACTGCTCTTACATTTTCAGATGGAAAAGCCTAGAAATAGGAAAGTTAGCAATGGGATATGGACTCTTGTATCTTCCTTCAATGTCTGAAGTCAAACAACACAGACTCTCCAGTGAGGGTTTCACACCTGTTGCAGACATCAAGTTTGAGGACATCAAGTTCAAGGACAAATCTAGGGAGAAGCAGAGGAAGCAGAACATGCAAGCAAGGAAAGAGAAACGGCAACAAGAGAAAAAGGAGAAAGGCAAGAAGAACTCGAAAAAGGCGGTTGTTGCTGCTGCCGCAGATTCTAACAAGAGGAAGTTGACAGGAAAGCAGAGACAAACCATCCAAACCGCGGAAGATGAAGAAGAGATGGCTCGAGATTATCGGTTACTTAAGAAACTCAAGAAAGGTTCTATTAAAGAAGATGATTTTGCTAAACTTACAGGAGCTGATGACTTCTAA
Protein:  
MDPSSSNTNKALTETRFSDLEPPLSEDIIEALERSGFEFCTPVQAATIPLLCRHKDVAVDAATGSGKTLAFVLPLIEILRRSTSYPPKAHQVMGVIISPTRELSTQIYNVAQPFVSTLPNVNSVLLVGGREVKSDMSTIEEGGCNLLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQKQVNSIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSESSSQQLTNSKVPSGLHLEYLVCEADKKSSQLVDLLVENEKKKLIVYFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEFMRRRGVPCQEKECSEEASDVIPIIRSLAMKDRAVLEKGLKAFVSFVRGYKEHHCSYIFRWKSLEIGKLAMGYGLLYLPSMSEVKQHRLSSEGFTPVADIKFEDIKFKDKSREKQRKQNMQARKEKRQQEKKEKGKKNSKKAVVAAAADSNKRKLTGKQRQTIQTAEDEEEMARDYRLLKKLKKGSIKEDDFAKLTGADDF